Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 HMGB3P1-201ENST00000393368 573 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 RPSAP72-201ENST00000407020 358 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AL137074.1-201ENST00000442640 465 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 RN7SL563P-201ENST00000481233 298 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AC006070.1-201ENST00000508151 193 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 ENPP7P3-201ENST00000509123 241 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 DNM1P31-201ENST00000564149 696 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AC103724.4-201ENST00000605981 292 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AC007620.3-201ENST00000608131 497 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 FGG-204ENST00000405164 1539 ntTSL 5 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AC130464.1-201ENST00000416201 1500 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 PSMC1P7-201ENST00000495689 1315 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC125603.4-201ENST00000621942 2699 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AL590065.1-201ENST00000603371 4774 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AL139327.1-201ENST00000382988 348 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 MIR555-201ENST00000384987 96 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 IL6-202ENST00000401630 765 ntTSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 MIR1231-201ENST00000408101 92 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 PGAM1P3-201ENST00000420790 565 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 RNF11P2-201ENST00000427702 440 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 SLC25A24P1-202ENST00000434803 1220 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 FDPSP8-201ENST00000438304 1089 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 ST13P2-201ENST00000438916 1109 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 RPL6P24-201ENST00000445338 864 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 HIST1H2APS6-201ENST00000448609 364 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 TCEAL4P1-201ENST00000453620 588 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC016489.1-201ENST00000461109 375 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC022730.2-201ENST00000465359 452 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC118282.1-201ENST00000506408 765 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 AC114322.1-201ENST00000506771 926 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 SNRPGP1-201ENST00000553864 222 ntBASIC8□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms