Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 IST1-208ENST00000535424 4082 ntTSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 ARHGAP42P5-201ENST00000548856 2936 ntBASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
C9orf40Q8IXQ3 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 AP002991.2-201ENST00000623807 2801 ntBASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
C9orf40Q8IXQ3 AL080312.1-201ENST00000256654 824 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 RBMX2P2-201ENST00000257020 946 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 RN7SKP63-201ENST00000363187 301 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 SNORA30B-201ENST00000365319 129 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 RN7SKP1-201ENST00000365525 307 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 NXT2-204ENST00000372107 937 ntTSL 3 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC113608.1-201ENST00000398740 305 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 RN7SKP131-201ENST00000410698 301 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 FBP2P1-202ENST00000424473 530 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC005040.1-201ENST00000437783 482 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC004692.1-201ENST00000455430 424 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC015820.1-201ENST00000473882 321 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC008799.2-201ENST00000484429 647 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 RN7SL153P-201ENST00000486501 292 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 RN7SL516P-201ENST00000496127 297 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC108120.1-201ENST00000506543 991 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 SNX29P2-204ENST00000603801 875 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 MIR6736-201ENST00000616799 59 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 OR5AU1-204ENST00000641822 1197 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC006058.1-201ENST00000568686 5067 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC069222.1-201ENST00000608028 3360 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 AL606490.2-201ENST00000457562 1330 ntBASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
C9orf40Q8IXQ3 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AC090643.1-201ENST00000623600 3100 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 SNORD15A-201ENST00000384214 148 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AC226101.1-201ENST00000401483 387 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 TAS2R2P-201ENST00000421146 910 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AL591379.2-201ENST00000450223 397 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 FTH1P7-201ENST00000450676 552 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 AC016489.1-201ENST00000461109 375 ntBASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.95□□□□□ -1.3
C9orf40Q8IXQ3 RN7SL563P-201ENST00000481233 298 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms