Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC020658.1-201ENST00000471253 938 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 RPL7AP56-201ENST00000476420 791 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC026414.1-201ENST00000504046 698 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 PRR5L-209ENST00000527487 740 ntTSL 3 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 OR7E1P-201ENST00000533891 958 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC048344.2-201ENST00000547280 147 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC011611.5-201ENST00000552477 578 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 SRMP2-201ENST00000553832 916 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC087465.1-201ENST00000560574 245 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 TRIM16-214ENST00000579219 999 ntTSL 2 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC005242.1-201ENST00000585658 438 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 YWHAQP7-201ENST00000603536 658 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC006270.3-201ENST00000605967 1036 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AL445423.1-201ENST00000609941 536 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC068234.2-201ENST00000619646 522 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 USP12-203ENST00000620323 349 ntTSL 3 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC135068.3-201ENST00000623441 1125 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 IL1R1-203ENST00000409589 3544 ntTSL 5 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 ATG13-207ENST00000526508 4199 ntTSL 5 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 SLC22A2-201ENST00000366952 3737 ntTSL 5 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 SCN5A-206ENST00000425664 8450 ntTSL 5 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 SSBP3-AS1-201ENST00000361350 2624 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 LINC01936-201ENST00000421976 2952 ntTSL 4 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 GTF2IP1-205ENST00000618412 2990 ntTSL 2 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 MX1-203ENST00000398600 3470 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 IRF2-201ENST00000393593 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 PRPF38B-203ENST00000370025 3693 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 TSGA10-203ENST00000393483 3878 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 GGA3-201ENST00000537686 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 GUCY1A3-204ENST00000455639 2631 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 CSGALNACT1-203ENST00000454498 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 PDCL-201ENST00000259467 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 PREPL-202ENST00000378511 2315 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 SLC4A4-205ENST00000512686 2316 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 C11orf54-201ENST00000331239 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 IL24-207ENST00000611909 1621 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 RNU4-51P-201ENST00000364206 140 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 MTIF3-201ENST00000381116 1104 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AL139098.1-201ENST00000407291 389 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 IGLC6-201ENST00000410078 317 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AP001116.1-201ENST00000421604 762 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC009480.2-201ENST00000422916 432 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 ZDHHC20P2-201ENST00000424108 429 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 SEPHS1P6-201ENST00000443084 1179 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 ARAFP3-201ENST00000454154 490 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 RN7SL259P-201ENST00000478499 253 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 ATXN7L1-208ENST00000478915 1115 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AL135933.1-201ENST00000498657 802 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 OR7E154P-201ENST00000525174 932 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 FCF1-203ENST00000553615 954 ntTSL 3 BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms