Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MT1L-202ENST00000566367 78 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 PPATP2-201ENST00000605635 508 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AP004247.4-201ENST00000608484 942 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 PFN1P2-202ENST00000621347 397 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 MIR6723-201ENST00000621981 89 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AP003400.2-201ENST00000624036 666 ntBASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM48Q8IWZ4 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC022415.1-201ENST00000472362 1517 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 XRCC6P3-201ENST00000422187 1621 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 OR56A1-201ENST00000316650 1071 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC007618.1-201ENST00000366455 732 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 KIF4CP-201ENST00000422742 1279 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC118653.1-201ENST00000442627 561 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AL122013.1-201ENST00000473054 801 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 IGKV3-34-201ENST00000521692 293 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 HNRNPRP2-201ENST00000528421 743 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC006065.2-201ENST00000536978 211 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 IGHV1OR15-4-201ENST00000560037 348 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 MRPL45P2-203ENST00000573318 473 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 MIR4793-201ENST00000577502 87 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 PRR13P4-201ENST00000577786 421 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC012653.2-201ENST00000621880 420 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AP003485.1-201ENST00000625093 753 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC134981.1-201ENST00000628076 348 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 MFSD8-234ENST00000641503 1082 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC087885.1-201ENST00000641910 848 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 CDY10P-201ENST00000452415 1567 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 AC008985.1-201ENST00000624169 2239 ntBASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
TRIM48Q8IWZ4 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.16
TRIM48Q8IWZ4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
TRIM48Q8IWZ4 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.16
TRIM48Q8IWZ4 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.77□□□□□ -1.16
TRIM48Q8IWZ4 SND1-IT1-201ENST00000623342 2481 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms