Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.92□□□□□ -0.98
HLA-DOAP06340 SSX6-201ENST00000376932 562 ntBASIC8.92□□□□□ -0.98
HLA-DOAP06340 TYMSP1-201ENST00000407851 869 ntBASIC8.92□□□□□ -0.98
HLA-DOAP06340 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HLA-DOAP06340 AC092646.1-201ENST00000427142 901 ntBASIC8.92□□□□□ -0.98
HLA-DOAP06340 FECHP1-201ENST00000431896 1214 ntBASIC8.92□□□□□ -0.98
HLA-DOAP06340 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 AL139123.1-201ENST00000612008 430 ntBASIC8.92□□□□□ -0.98
HLA-DOAP06340 AC006213.4-201ENST00000616184 634 ntBASIC8.92□□□□□ -0.98
HLA-DOAP06340 AC073488.7-201ENST00000633785 778 ntBASIC8.92□□□□□ -0.98
HLA-DOAP06340 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HLA-DOAP06340 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HLA-DOAP06340 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HLA-DOAP06340 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 ERVV-2-201ENST00000601417 2431 ntAPPRIS P1 TSL 4 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.92□□□□□ -0.98
HLA-DOAP06340 AL360295.1-201ENST00000425435 1824 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 AC013399.1-201ENST00000450311 418 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 RN7SL791P-201ENST00000467868 295 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 AC008040.4-201ENST00000494834 768 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 USP9YP2-201ENST00000504503 1000 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 USP9YP1-201ENST00000513521 1002 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 RNU2-45P-201ENST00000516068 187 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 NF1P12-201ENST00000549593 583 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 MIR1273F-201ENST00000580581 99 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 AL136139.1-201ENST00000605568 222 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 U47924.1-201ENST00000606539 434 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 RN7SL778P-201ENST00000607160 297 ntBASIC8.91□□□□□ -0.98
HLA-DOAP06340 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.91□□□□□ -0.98
HLA-DOAP06340 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HLA-DOAP06340 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HLA-DOAP06340 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HLA-DOAP06340 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HLA-DOAP06340 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HLA-DOAP06340 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 AL078621.1-201ENST00000272567 768 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 RNA5SP442-201ENST00000365050 107 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 RN7SKP225-201ENST00000410405 352 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 AL161742.1-201ENST00000418154 584 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 AC009303.1-201ENST00000426307 352 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 RPL36AP55-201ENST00000454114 305 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 SNORA35.1-201ENST00000458908 128 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 AC013787.1-201ENST00000460165 307 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 AC005550.2-201ENST00000476382 318 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 EGLN3P1-201ENST00000541727 720 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 AC023080.1-201ENST00000551663 931 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.9□□□□□ -0.98
HLA-DOAP06340 RN7SL835P-201ENST00000579920 262 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 AC016405.2-201ENST00000607393 312 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 AC080112.3-201ENST00000612552 880 ntBASIC8.9□□□□□ -0.98
HLA-DOAP06340 AC027506.1-201ENST00000621395 198 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms