Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 YWHAZP7-201ENST00000436906 631 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 MTCO3P18-201ENST00000440206 761 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC008280.2-201ENST00000455473 307 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 FXYD6P3-201ENST00000495569 285 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC005178.1-201ENST00000508392 440 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC109811.2-201ENST00000509609 452 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC104117.3-201ENST00000519491 674 ntTSL 3 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 BUD31P1-201ENST00000521828 359 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC022762.1-201ENST00000529961 816 ntTSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC027288.3-203ENST00000553165 448 ntTSL 3 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC009171.1-201ENST00000572673 266 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 ABBA01006766.1-201ENST00000584728 294 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC090699.1-201ENST00000586264 321 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 C5orf58-206ENST00000593851 509 ntAPPRIS P5 TSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC027243.2-201ENST00000602530 724 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 AL390208.1-201ENST00000605885 644 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AL159169.3-201ENST00000608871 561 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC024614.3-201ENST00000637860 256 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 FBXO48-201ENST00000377957 5666 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 SFTPB-207ENST00000519937 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 PRSS54-202ENST00000543437 1555 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 ABCC2-201ENST00000370434 1714 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AL022334.1-201ENST00000417397 1726 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 HACL1-208ENST00000456194 1880 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 CFLAR-215ENST00000457277 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 CUL9-202ENST00000372647 7684 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 SORD2P-202ENST00000561384 2498 ntTSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 C11orf57-202ENST00000393047 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 MRPL1-201ENST00000315567 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 ACOT9-204ENST00000379303 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 ZBTB20-203ENST00000462705 3740 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LRCH3Q96II8 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LRCH3Q96II8 AC005154.1-215ENST00000584621 2437 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
LRCH3Q96II8 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC9.77□□□□□ -0.84
LRCH3Q96II8 RAF1P1-201ENST00000508566 1696 ntBASIC9.77□□□□□ -0.84
LRCH3Q96II8 AC139700.1-201ENST00000605810 1540 ntBASIC9.77□□□□□ -0.84
LRCH3Q96II8 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LRCH3Q96II8 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
LRCH3Q96II8 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
LRCH3Q96II8 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC005165.1-201ENST00000446840 1870 ntTSL 2 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 GRM1-207ENST00000507907 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 USP17L12-201ENST00000415041 1593 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 USP17L21-201ENST00000506414 1593 ntAPPRIS P2 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 OR4N4-201ENST00000328795 1126 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 MIR296-201ENST00000385215 80 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 MIR30C1-201ENST00000385227 89 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 RPS7P9-201ENST00000414704 586 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 UBTFL3-201ENST00000418934 1024 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 USP9YP18-201ENST00000425912 695 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 DEFB130D-201ENST00000426866 237 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 RANP5-201ENST00000427731 655 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 NPM1P22-201ENST00000427761 952 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 RPS23P8-201ENST00000429775 330 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 GAPDHP34-201ENST00000432112 823 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 AL392003.1-201ENST00000434394 243 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 COX7BP2-201ENST00000437976 242 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LRCH3Q96II8 USP9YP8-201ENST00000441913 500 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 PSMA2-204ENST00000445517 683 ntTSL 2 BASIC9.77□□□□□ -0.85
LRCH3Q96II8 AC093582.1-201ENST00000447086 385 ntBASIC9.77□□□□□ -0.85
LRCH3Q96II8 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms