Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.31□□□□□ -1.24
SKP1P63208 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
SKP1P63208 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 AL161891.1-201ENST00000621575 4636 ntBASIC7.31□□□□□ -1.24
SKP1P63208 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.3□□□□□ -1.24
SKP1P63208 AL022163.1-201ENST00000430261 1569 ntBASIC7.3□□□□□ -1.24
SKP1P63208 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.3□□□□□ -1.24
SKP1P63208 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SKP1P63208 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SKP1P63208 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SKP1P63208 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.3□□□□□ -1.24
SKP1P63208 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 MIR555-201ENST00000384987 96 ntBASIC7.3□□□□□ -1.24
SKP1P63208 BCRP8-201ENST00000412037 255 ntBASIC7.3□□□□□ -1.24
SKP1P63208 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC7.3□□□□□ -1.24
SKP1P63208 GAPDHP46-201ENST00000424043 994 ntBASIC7.3□□□□□ -1.24
SKP1P63208 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC7.3□□□□□ -1.24
SKP1P63208 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.3□□□□□ -1.24
SKP1P63208 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC7.3□□□□□ -1.24
SKP1P63208 OR3B1P-201ENST00000437536 893 ntBASIC7.3□□□□□ -1.24
SKP1P63208 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC7.3□□□□□ -1.24
SKP1P63208 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.3□□□□□ -1.24
SKP1P63208 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.3□□□□□ -1.24
SKP1P63208 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC7.3□□□□□ -1.24
SKP1P63208 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.3□□□□□ -1.24
SKP1P63208 RPL34P22-201ENST00000468193 318 ntBASIC7.3□□□□□ -1.24
SKP1P63208 RN7SL332P-201ENST00000482163 254 ntBASIC7.3□□□□□ -1.24
SKP1P63208 RN7SL635P-201ENST00000492123 296 ntBASIC7.3□□□□□ -1.24
SKP1P63208 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.3□□□□□ -1.24
SKP1P63208 OR7E83P-201ENST00000511021 970 ntBASIC7.3□□□□□ -1.24
SKP1P63208 ADI1P2-201ENST00000514945 429 ntBASIC7.3□□□□□ -1.24
SKP1P63208 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC7.3□□□□□ -1.24
SKP1P63208 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.3□□□□□ -1.24
SKP1P63208 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.3□□□□□ -1.24
SKP1P63208 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC7.3□□□□□ -1.24
SKP1P63208 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.3□□□□□ -1.24
SKP1P63208 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC7.3□□□□□ -1.24
SKP1P63208 RN7SL237P-201ENST00000580912 287 ntBASIC7.3□□□□□ -1.24
SKP1P63208 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC7.3□□□□□ -1.24
SKP1P63208 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.3□□□□□ -1.24
SKP1P63208 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.3□□□□□ -1.24
SKP1P63208 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.3□□□□□ -1.24
SKP1P63208 AC022239.4-201ENST00000602626 504 ntBASIC7.3□□□□□ -1.24
SKP1P63208 AL049829.3-202ENST00000604278 711 ntBASIC7.3□□□□□ -1.24
SKP1P63208 RN7SL760P-201ENST00000607344 270 ntBASIC7.3□□□□□ -1.24
SKP1P63208 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.3□□□□□ -1.24
SKP1P63208 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SKP1P63208 C18orf12-201ENST00000623329 537 ntBASIC7.3□□□□□ -1.24
SKP1P63208 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC7.3□□□□□ -1.24
SKP1P63208 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.3□□□□□ -1.24
SKP1P63208 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SKP1P63208 BIN2P2-201ENST00000503900 1303 ntBASIC7.29□□□□□ -1.24
SKP1P63208 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC7.29□□□□□ -1.24
SKP1P63208 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SKP1P63208 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SKP1P63208 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.29□□□□□ -1.24
SKP1P63208 HSPD1P10-201ENST00000404829 1676 ntBASIC7.29□□□□□ -1.24
SKP1P63208 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.29□□□□□ -1.24
SKP1P63208 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SKP1P63208 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SKP1P63208 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SKP1P63208 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SKP1P63208 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.29□□□□□ -1.24
SKP1P63208 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SKP1P63208 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.29□□□□□ -1.24
SKP1P63208 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SKP1P63208 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SKP1P63208 RNA5SP79-201ENST00000365193 109 ntBASIC7.29□□□□□ -1.24
SKP1P63208 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.29□□□□□ -1.24
SKP1P63208 RNA5SP18-201ENST00000390935 121 ntBASIC7.29□□□□□ -1.24
SKP1P63208 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.29□□□□□ -1.24
SKP1P63208 MAML3-201ENST00000398940 831 ntTSL 5 BASIC7.29□□□□□ -1.24
SKP1P63208 HNRNPCP2-201ENST00000399515 881 ntBASIC7.29□□□□□ -1.24
SKP1P63208 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC7.29□□□□□ -1.24
SKP1P63208 AC092042.2-201ENST00000417304 331 ntBASIC7.29□□□□□ -1.24
SKP1P63208 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC7.29□□□□□ -1.24
SKP1P63208 RPSAP59-201ENST00000421048 890 ntBASIC7.29□□□□□ -1.24
SKP1P63208 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC7.29□□□□□ -1.24
SKP1P63208 AC002553.1-201ENST00000442828 802 ntBASIC7.29□□□□□ -1.24
SKP1P63208 RPL4P2-201ENST00000447259 1282 ntBASIC7.29□□□□□ -1.24
SKP1P63208 AC007000.1-201ENST00000453064 794 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms