Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.91□□□□□ -1.14
SLC1A1P43005 AC100823.2-201ENST00000518337 699 ntBASIC7.91□□□□□ -1.14
SLC1A1P43005 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC7.91□□□□□ -1.14
SLC1A1P43005 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC7.91□□□□□ -1.14
SLC1A1P43005 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
SLC1A1P43005 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC7.91□□□□□ -1.14
SLC1A1P43005 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC7.91□□□□□ -1.14
SLC1A1P43005 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC7.91□□□□□ -1.14
SLC1A1P43005 HCCAT5-202ENST00000642127 1029 ntBASIC7.91□□□□□ -1.14
SLC1A1P43005 AC007923.2-201ENST00000584218 1591 ntBASIC7.91□□□□□ -1.14
SLC1A1P43005 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.91□□□□□ -1.14
SLC1A1P43005 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SLC1A1P43005 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.9□□□□□ -1.14
SLC1A1P43005 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
SLC1A1P43005 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.9□□□□□ -1.14
SLC1A1P43005 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 HCG18-244ENST00000602516 2890 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.9□□□□□ -1.14
SLC1A1P43005 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
SLC1A1P43005 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 EEF1A1P15-201ENST00000395772 1408 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 RNA5SP378-201ENST00000363646 120 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 AL109918.1-202ENST00000406724 436 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 CTSLP8-201ENST00000413075 967 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC7.9□□□□□ -1.14
SLC1A1P43005 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.9□□□□□ -1.14
SLC1A1P43005 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.9□□□□□ -1.14
SLC1A1P43005 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC7.9□□□□□ -1.14
SLC1A1P43005 EFCAB14P1-201ENST00000442409 463 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC7.9□□□□□ -1.14
SLC1A1P43005 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.9□□□□□ -1.14
SLC1A1P43005 RPS20P23-201ENST00000461683 354 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 AC090680.1-201ENST00000464696 860 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 RN7SL869P-201ENST00000497032 300 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 NPY6R-201ENST00000503807 1112 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.9□□□□□ -1.14
SLC1A1P43005 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.9□□□□□ -1.14
SLC1A1P43005 RN7SL376P-201ENST00000578594 264 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.9□□□□□ -1.14
SLC1A1P43005 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC7.9□□□□□ -1.14
SLC1A1P43005 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.9□□□□□ -1.14
SLC1A1P43005 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.9□□□□□ -1.14
SLC1A1P43005 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.9□□□□□ -1.14
SLC1A1P43005 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 MIR6761-201ENST00000617899 72 ntBASIC7.9□□□□□ -1.14
SLC1A1P43005 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC7.9□□□□□ -1.14
SLC1A1P43005 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.9□□□□□ -1.14
SLC1A1P43005 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.9□□□□□ -1.14
SLC1A1P43005 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SLC1A1P43005 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
SLC1A1P43005 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
SLC1A1P43005 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SLC1A1P43005 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.9□□□□□ -1.15
SLC1A1P43005 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
SLC1A1P43005 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SLC1A1P43005 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SLC1A1P43005 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.9□□□□□ -1.15
SLC1A1P43005 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.9□□□□□ -1.15
SLC1A1P43005 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SLC1A1P43005 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.89□□□□□ -1.15
SLC1A1P43005 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
SLC1A1P43005 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SLC1A1P43005 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
SLC1A1P43005 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SLC1A1P43005 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
SLC1A1P43005 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SLC1A1P43005 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.89□□□□□ -1.15
SLC1A1P43005 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.89□□□□□ -1.15
SLC1A1P43005 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SLC1A1P43005 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SLC1A1P43005 TRIM64EP-201ENST00000531233 1307 ntBASIC7.89□□□□□ -1.15
SLC1A1P43005 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms