Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 C1orf74-201ENST00000294811 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 AL138690.1-201ENST00000568811 2243 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 IL17A-201ENST00000340057 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 ZNF711-203ENST00000373165 4124 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 LRRC37A15P-201ENST00000514785 1355 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 NLGN4X-208ENST00000538097 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 MAPK10-382ENST00000642023 2369 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 SNORD3G-201ENST00000362796 215 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 CNN2P7-201ENST00000400583 932 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 TDGF1P4-201ENST00000401555 520 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 GLS-205ENST00000409626 997 ntTSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 EEF1A1P40-201ENST00000412883 573 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 ZRANB2-AS2-202ENST00000413421 826 ntTSL 3 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC138393.2-201ENST00000414742 246 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC098592.1-201ENST00000419352 333 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC114760.1-201ENST00000420310 652 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 RPL23AP85-201ENST00000421838 433 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 ANKRD30BP3-201ENST00000444850 1070 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC008628.2-201ENST00000502605 298 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 NENFP3-201ENST00000503735 313 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 LECT2-203ENST00000512872 762 ntTSL 5 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 RN7SKP244-201ENST00000516513 307 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 RFPL4AP7-201ENST00000520120 215 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 AP006587.5-201ENST00000532033 739 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 IGHV1OR15-4-201ENST00000560037 348 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 GARSP1-201ENST00000570895 719 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC008753.2-201ENST00000597420 387 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 U73023.1-201ENST00000603134 700 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 BNIP3P37-201ENST00000604107 901 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AP002345.2-201ENST00000609961 904 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC009237.15-201ENST00000610252 501 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC243571.2-202ENST00000613901 575 ntTSL 4 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 Metazoa_SRP.136-201ENST00000614846 283 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AL590410.1-201ENST00000617925 333 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC134981.1-201ENST00000628076 348 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 MIR3191-201ENST00000636300 76 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 ENSA-215ENST00000638926 360 ntTSL 5 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 SRGAP2-217ENST00000624873 4705 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 MEIS2-203ENST00000340545 3056 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 AP001425.1-201ENST00000632732 1940 ntBASIC9.79□□□□□ -0.84
LRCH3Q96II8 AC019330.1-201ENST00000637390 1692 ntTSL 5 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 PDXDC1-210ENST00000563679 2963 ntTSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 TMEM254-AS1-201ENST00000412298 3121 ntTSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 MITF-209ENST00000448226 2489 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 GSDMC-204ENST00000619643 1831 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 LINC02280-201ENST00000564585 3816 ntTSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 ZNF750-201ENST00000269394 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 LYPD4-203ENST00000609812 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 ZSCAN32-212ENST00000574940 2180 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 PIN4-201ENST00000218432 1780 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 TNIP3-203ENST00000507879 1778 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 MED23-204ENST00000368060 4446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 ELF2P3-201ENST00000445099 1506 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 KLHL14-202ENST00000359358 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC023300.3-201ENST00000623096 5025 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 SLAMF7-202ENST00000368042 2365 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LRCH3Q96II8 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 USP54-201ENST00000339859 6247 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 RN7SKP294-201ENST00000362770 338 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 COQ3-202ENST00000369240 646 ntTSL 5 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC074375.1-201ENST00000372993 192 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 NPM1P46-201ENST00000399556 865 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC023128.2-201ENST00000420880 1223 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 AC007362.1-208ENST00000423425 553 ntTSL 4 BASIC9.78□□□□□ -0.84
LRCH3Q96II8 RPL36P2-201ENST00000426026 315 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 PAICSP3-201ENST00000428007 1168 ntBASIC9.78□□□□□ -0.84
LRCH3Q96II8 PRPS1P2-201ENST00000430496 937 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms