Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.96□□□□□ -0.97
HLA-DOAP06340 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
HLA-DOAP06340 SF3A3P1-201ENST00000446317 1477 ntBASIC8.96□□□□□ -0.97
HLA-DOAP06340 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
HLA-DOAP06340 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC8.96□□□□□ -0.97
HLA-DOAP06340 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.96□□□□□ -0.97
HLA-DOAP06340 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
HLA-DOAP06340 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
HLA-DOAP06340 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
HLA-DOAP06340 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
HLA-DOAP06340 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.96□□□□□ -0.97
HLA-DOAP06340 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.96□□□□□ -0.97
HLA-DOAP06340 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
HLA-DOAP06340 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.96□□□□□ -0.97
HLA-DOAP06340 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HLA-DOAP06340 RNA5SP396-201ENST00000364834 120 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 AL117344.1-201ENST00000407196 616 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 RN7SKP30-201ENST00000411373 334 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 VN1R35P-201ENST00000428102 693 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 AC087499.3-202ENST00000441215 1173 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 AC239800.1-201ENST00000442049 719 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HLA-DOAP06340 AC090680.1-201ENST00000464696 860 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 AC068631.3-201ENST00000538831 225 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
HLA-DOAP06340 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 AC092368.2-201ENST00000565911 600 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HLA-DOAP06340 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 AL353807.4-201ENST00000604995 257 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
HLA-DOAP06340 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 ANKRD20A5P-201ENST00000431648 3556 ntBASIC8.96□□□□□ -0.98
HLA-DOAP06340 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HLA-DOAP06340 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
HLA-DOAP06340 ST5-237ENST00000530991 3396 ntTSL 2 BASIC8.96□□□□□ -0.98
HLA-DOAP06340 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
HLA-DOAP06340 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HLA-DOAP06340 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HLA-DOAP06340 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HLA-DOAP06340 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HLA-DOAP06340 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HLA-DOAP06340 RN7SKP63-201ENST00000363187 301 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 MIR431-201ENST00000385266 114 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HLA-DOAP06340 NUS1P4-201ENST00000401550 585 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 RN7SKP131-201ENST00000410698 301 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC020983.1-201ENST00000417063 543 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 RPS19P6-201ENST00000441327 433 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AL451074.4-201ENST00000447545 470 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 AL024493.1-201ENST00000449217 833 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 CREM-224ENST00000468236 582 ntTSL 3 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC073648.3-201ENST00000504939 925 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AP004607.5-201ENST00000532034 217 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC8.95□□□□□ -0.98
HLA-DOAP06340 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC006116.6-201ENST00000593258 1103 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC116003.3-201ENST00000612669 541 ntBASIC8.95□□□□□ -0.98
HLA-DOAP06340 AC103564.3-201ENST00000621194 220 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms