Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FOXG1P55316 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
FOXG1P55316 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.75□□□□□ -1.33
FOXG1P55316 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 LINC02035-201ENST00000610128 5476 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
FOXG1P55316 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXG1P55316 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXG1P55316 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXG1P55316 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXG1P55316 AL139327.1-201ENST00000382988 348 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
FOXG1P55316 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 U3.31-201ENST00000408113 216 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXG1P55316 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC6.74□□□□□ -1.33
FOXG1P55316 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXG1P55316 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
FOXG1P55316 AL590682.1-201ENST00000437248 344 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC6.74□□□□□ -1.33
FOXG1P55316 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXG1P55316 FO393419.1-201ENST00000443746 355 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 RPL7P14-201ENST00000449851 741 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 EIF2S2P5-201ENST00000457635 968 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 RN7SL282P-201ENST00000479676 297 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 AC079768.1-201ENST00000503181 711 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 AC008629.3-201ENST00000505786 586 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 HSPE1P10-201ENST00000508631 558 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 AC106774.2-201ENST00000510266 406 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXG1P55316 RN7SKP2-201ENST00000517003 319 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 IGKV3D-31-201ENST00000519131 281 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXG1P55316 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC6.74□□□□□ -1.33
FOXG1P55316 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXG1P55316 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.74□□□□□ -1.33
FOXG1P55316 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXG1P55316 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC6.74□□□□□ -1.33
FOXG1P55316 NDUFA3P1-201ENST00000588007 252 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 AC007136.1-201ENST00000589141 199 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC6.74□□□□□ -1.33
FOXG1P55316 AL512356.3-201ENST00000623005 461 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 AC110769.3-201ENST00000624567 1173 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.74□□□□□ -1.33
FOXG1P55316 ST7-213ENST00000432298 1956 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXG1P55316 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXG1P55316 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
FOXG1P55316 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
FOXG1P55316 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC6.74□□□□□ -1.33
FOXG1P55316 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
FOXG1P55316 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.73□□□□□ -1.33
FOXG1P55316 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
FOXG1P55316 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXG1P55316 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
FOXG1P55316 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXG1P55316 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXG1P55316 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXG1P55316 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 AC009237.9-201ENST00000414800 347 ntBASIC6.73□□□□□ -1.33
FOXG1P55316 AC004986.1-201ENST00000414855 607 ntBASIC6.73□□□□□ -1.33
FOXG1P55316 MED15P9-201ENST00000424716 533 ntBASIC6.73□□□□□ -1.33
FOXG1P55316 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXG1P55316 AC140479.1-201ENST00000440423 337 ntBASIC6.73□□□□□ -1.33
FOXG1P55316 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXG1P55316 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXG1P55316 AC007547.2-201ENST00000468802 360 ntBASIC6.73□□□□□ -1.33
FOXG1P55316 RN7SL815P-201ENST00000470970 290 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms