Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLIC4Q9Y696 PTBP1P-201ENST00000554374 1601 ntBASIC22.98■■□□□ 1.27
CLIC4Q9Y696 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLIC4Q9Y696 MCRIP2P1-201ENST00000394346 511 ntBASIC22.98■■□□□ 1.27
CLIC4Q9Y696 CYP2T1P-201ENST00000432607 1285 ntBASIC22.98■■□□□ 1.27
CLIC4Q9Y696 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLIC4Q9Y696 AC022517.1-201ENST00000592429 346 ntBASIC22.98■■□□□ 1.27
CLIC4Q9Y696 BID-214ENST00000617586 542 ntTSL 5 BASIC22.98■■□□□ 1.27
CLIC4Q9Y696 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CLIC4Q9Y696 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CLIC4Q9Y696 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLIC4Q9Y696 AL158211.5-201ENST00000623583 2518 ntBASIC22.98■■□□□ 1.27
CLIC4Q9Y696 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.98■■□□□ 1.27
CLIC4Q9Y696 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CLIC4Q9Y696 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 AL355472.2-201ENST00000422958 438 ntBASIC22.97■■□□□ 1.27
CLIC4Q9Y696 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 AC100791.3-201ENST00000617619 330 ntBASIC22.97■■□□□ 1.27
CLIC4Q9Y696 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 AC007952.6-201ENST00000573168 2673 ntBASIC22.97■■□□□ 1.27
CLIC4Q9Y696 AC003957.1-201ENST00000625108 2673 ntBASIC22.97■■□□□ 1.27
CLIC4Q9Y696 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.97■■□□□ 1.27
CLIC4Q9Y696 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CLIC4Q9Y696 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.96■■□□□ 1.27
CLIC4Q9Y696 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CLIC4Q9Y696 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CLIC4Q9Y696 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CLIC4Q9Y696 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 AC004911.1-201ENST00000416316 871 ntBASIC22.94■■□□□ 1.26
CLIC4Q9Y696 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLIC4Q9Y696 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CLIC4Q9Y696 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.93■■□□□ 1.26
CLIC4Q9Y696 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms