Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 SMG8-203ENST00000578922 2178 ntBASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 GCSHP5-201ENST00000443090 522 ntBASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAI2Q9Y5P3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.33■□□□□ 0.85
RAI2Q9Y5P3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.33■□□□□ 0.84
RAI2Q9Y5P3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RAI2Q9Y5P3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RAI2Q9Y5P3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 PTBP1P-201ENST00000554374 1601 ntBASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 AL512408.1-201ENST00000569378 2000 ntBASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
RAI2Q9Y5P3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 AL158047.1-201ENST00000445918 881 ntBASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 RPS2P4-201ENST00000476944 856 ntBASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.31■□□□□ 0.84
RAI2Q9Y5P3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.3■□□□□ 0.84
RAI2Q9Y5P3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms