Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PCDHGA3Q9Y5H0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA3Q9Y5H0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
PCDHGA3Q9Y5H0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 POM121L13P-201ENST00000422362 380 ntBASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA3Q9Y5H0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 C2orf69P4-201ENST00000565394 541 ntBASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA3Q9Y5H0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA3Q9Y5H0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 AC233263.1-201ENST00000578059 224 ntBASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 MIR4497-201ENST00000583208 89 ntBASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA3Q9Y5H0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms