Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 AC007225.1-201ENST00000566331 1836 ntBASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 AL356652.1-201ENST00000615962 565 ntBASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 FP700111.2-201ENST00000619190 1892 ntBASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB11Q9Y5F2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 MIR718-201ENST00000390190 70 ntBASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 AC060766.5-201ENST00000590539 871 ntBASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 FAM197Y4-202ENST00000622692 608 ntBASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB11Q9Y5F2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 AC008550.1-201ENST00000511500 884 ntBASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 HLA-B-256ENST00000639848 1089 ntBASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB11Q9Y5F2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 AC105020.6-201ENST00000621523 1217 ntBASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 KRT8P36-201ENST00000489121 1440 ntBASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 GABARAPL3-202ENST00000624044 1851 ntBASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB11Q9Y5F2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHB11Q9Y5F2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms