Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 KRT16P3-201ENST00000439127 1283 ntBASIC18.99■□□□□ 0.63
AP4S1Q9Y587 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.99■□□□□ 0.63
AP4S1Q9Y587 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 AC011298.3-201ENST00000615796 283 ntBASIC18.99■□□□□ 0.63
AP4S1Q9Y587 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 AC133561.4-201ENST00000566112 224 ntBASIC18.98■□□□□ 0.63
AP4S1Q9Y587 MIR3621-201ENST00000580529 85 ntBASIC18.98■□□□□ 0.63
AP4S1Q9Y587 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4S1Q9Y587 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 DUX4L19-201ENST00000557448 1267 ntBASIC18.97■□□□□ 0.63
AP4S1Q9Y587 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
AP4S1Q9Y587 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.96■□□□□ 0.63
AP4S1Q9Y587 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4S1Q9Y587 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 AC009299.2-201ENST00000482477 511 ntBASIC18.95■□□□□ 0.62
AP4S1Q9Y587 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 AC053503.5-201ENST00000601508 636 ntBASIC18.95■□□□□ 0.62
AP4S1Q9Y587 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4S1Q9Y587 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms