Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSM2Q9Y333 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.87■□□□□ 0.45
LSM2Q9Y333 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.87■□□□□ 0.45
LSM2Q9Y333 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM2Q9Y333 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSM2Q9Y333 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM2Q9Y333 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.87■□□□□ 0.45
LSM2Q9Y333 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM2Q9Y333 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM2Q9Y333 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM2Q9Y333 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM2Q9Y333 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM2Q9Y333 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM2Q9Y333 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LSM2Q9Y333 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM2Q9Y333 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.86■□□□□ 0.45
LSM2Q9Y333 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM2Q9Y333 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM2Q9Y333 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM2Q9Y333 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LSM2Q9Y333 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM2Q9Y333 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM2Q9Y333 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM2Q9Y333 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LSM2Q9Y333 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM2Q9Y333 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM2Q9Y333 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LSM2Q9Y333 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM2Q9Y333 AL032819.2-201ENST00000624543 2162 ntBASIC17.86■□□□□ 0.45
LSM2Q9Y333 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM2Q9Y333 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.85■□□□□ 0.45
LSM2Q9Y333 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LSM2Q9Y333 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LSM2Q9Y333 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.85■□□□□ 0.45
LSM2Q9Y333 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.85■□□□□ 0.45
LSM2Q9Y333 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM2Q9Y333 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 LINC01465-201ENST00000408887 1940 ntBASIC17.84■□□□□ 0.45
LSM2Q9Y333 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 AC005082.1-201ENST00000413042 2259 ntBASIC17.84■□□□□ 0.45
LSM2Q9Y333 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LSM2Q9Y333 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSM2Q9Y333 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LSM2Q9Y333 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LSM2Q9Y333 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.83■□□□□ 0.45
LSM2Q9Y333 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.83■□□□□ 0.44
LSM2Q9Y333 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSM2Q9Y333 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSM2Q9Y333 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.83■□□□□ 0.44
LSM2Q9Y333 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSM2Q9Y333 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.83■□□□□ 0.44
LSM2Q9Y333 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
LSM2Q9Y333 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.83■□□□□ 0.44
LSM2Q9Y333 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSM2Q9Y333 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LSM2Q9Y333 AC009237.14-201ENST00000609975 1594 ntBASIC17.83■□□□□ 0.44
LSM2Q9Y333 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSM2Q9Y333 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.83■□□□□ 0.44
LSM2Q9Y333 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LSM2Q9Y333 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM2Q9Y333 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms