Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
ZC3H4Q9UPT8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
ZC3H4Q9UPT8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
ZC3H4Q9UPT8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
ZC3H4Q9UPT8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.52■■□□□ 1.52
ZC3H4Q9UPT8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC24.52■■□□□ 1.52
ZC3H4Q9UPT8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ZC3H4Q9UPT8 AC128688.1-201ENST00000487626 519 ntBASIC24.52■■□□□ 1.52
ZC3H4Q9UPT8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZC3H4Q9UPT8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
ZC3H4Q9UPT8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZC3H4Q9UPT8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZC3H4Q9UPT8 ECEL1P2-202ENST00000465689 757 ntBASIC24.49■■□□□ 1.51
ZC3H4Q9UPT8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.49■■□□□ 1.51
ZC3H4Q9UPT8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ZC3H4Q9UPT8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZC3H4Q9UPT8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZC3H4Q9UPT8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ZC3H4Q9UPT8 FSCN1P1-201ENST00000568912 1481 ntBASIC24.49■■□□□ 1.51
ZC3H4Q9UPT8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZC3H4Q9UPT8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 AC124283.5-201ENST00000624661 1809 ntBASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 AC091390.4-202ENST00000476426 537 ntBASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 AL031985.4-201ENST00000642138 673 ntBASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.48■■□□□ 1.51
ZC3H4Q9UPT8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 AC117947.1-201ENST00000427448 529 ntBASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 FAM87A-204ENST00000613235 858 ntBASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
ZC3H4Q9UPT8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZC3H4Q9UPT8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ZC3H4Q9UPT8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZC3H4Q9UPT8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZC3H4Q9UPT8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZC3H4Q9UPT8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms