Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 RPS2P52-201ENST00000469610 820 ntBASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 KRT8P17-201ENST00000453110 1448 ntBASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN1Q9UMX0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 AL158047.1-201ENST00000445918 881 ntBASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
UBQLN1Q9UMX0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 C1QBPP2-201ENST00000528754 825 ntBASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 MTDHP1-201ENST00000605323 784 ntBASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 AL359736.2-201ENST00000621992 437 ntBASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.6■■□□□ 1.05
UBQLN1Q9UMX0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 RPPH1-201ENST00000516869 333 ntBASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBQLN1Q9UMX0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms