Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 SLC7A5P2-201ENST00000553010 536 ntBASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF2Q9P2I0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 DUX4L2-201ENST00000561772 1275 ntBASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 DUX4L6-201ENST00000626483 1275 ntBASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 DUX4L1-201ENST00000627662 1275 ntBASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 DUX4L8-201ENST00000629013 1275 ntBASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 DUX4L3-201ENST00000630187 1275 ntBASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 DUX4L7-201ENST00000630678 1275 ntBASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 DUX4L5-201ENST00000630834 1275 ntBASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.17■□□□□ 0.82
CPSF2Q9P2I0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 AP001160.3-201ENST00000601484 763 ntBASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF2Q9P2I0 SMG8-203ENST00000578922 2178 ntBASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 AC116050.2-201ENST00000612102 1779 ntBASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF2Q9P2I0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPSF2Q9P2I0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms