Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.4■□□□□ 0.7
SPHK1Q9NYA1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.39■□□□□ 0.7
SPHK1Q9NYA1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SPHK1Q9NYA1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPHK1Q9NYA1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPHK1Q9NYA1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.39■□□□□ 0.7
SPHK1Q9NYA1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 AP005212.1-201ENST00000581547 1997 ntBASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 AL157384.1-201ENST00000445995 2473 ntBASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 AC092667.1-201ENST00000434301 2586 ntBASIC19.39■□□□□ 0.69
SPHK1Q9NYA1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 AL390719.1-204ENST00000412397 1219 ntBASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 AC006058.3-201ENST00000606217 1069 ntBASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.38■□□□□ 0.69
SPHK1Q9NYA1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPHK1Q9NYA1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 AC008687.6-201ENST00000596318 630 ntBASIC19.36■□□□□ 0.69
SPHK1Q9NYA1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms