Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 Z99916.2-201ENST00000604037 246 ntBASIC20.75■□□□□ 0.91
VPS45Q9NRW7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 MIR2861-201ENST00000636310 90 ntBASIC20.75■□□□□ 0.91
VPS45Q9NRW7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 FEM1AP1-201ENST00000431297 1995 ntBASIC20.75■□□□□ 0.91
VPS45Q9NRW7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS45Q9NRW7 KRT17P1-201ENST00000399211 1546 ntBASIC20.74■□□□□ 0.91
VPS45Q9NRW7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 RN7SL471P-201ENST00000580476 299 ntBASIC20.74■□□□□ 0.91
VPS45Q9NRW7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VPS45Q9NRW7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 AC092667.1-201ENST00000434301 2586 ntBASIC20.73■□□□□ 0.91
VPS45Q9NRW7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS45Q9NRW7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 AL355472.2-201ENST00000422958 438 ntBASIC20.72■□□□□ 0.91
VPS45Q9NRW7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 AC100791.3-201ENST00000617619 330 ntBASIC20.72■□□□□ 0.91
VPS45Q9NRW7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS45Q9NRW7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms