Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AC092437.1-201ENST00000624794 1048 ntBASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CTPS2Q9NRF8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 AC007322.3-201ENST00000426526 701 ntBASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 DUX4L16-201ENST00000555130 1264 ntBASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS2Q9NRF8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 AC013268.1-206ENST00000638368 961 ntBASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 AC112229.1-201ENST00000639295 961 ntBASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 TCF3P1-201ENST00000423021 1937 ntBASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS2Q9NRF8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS2Q9NRF8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CTPS2Q9NRF8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 DPP3P2-201ENST00000416030 1696 ntBASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 AC004911.1-201ENST00000416316 871 ntBASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 CDV3P1-201ENST00000471403 739 ntBASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 AL591742.1-201ENST00000604433 565 ntBASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 AC007952.6-201ENST00000573168 2673 ntBASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 AC003957.1-201ENST00000625108 2673 ntBASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS2Q9NRF8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms