Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 CNN2P6-201ENST00000439038 900 ntBASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.27■□□□□ 0.68
TIMMDC1Q9NPL8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TIMMDC1Q9NPL8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.27■□□□□ 0.67
TIMMDC1Q9NPL8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 AC104771.1-201ENST00000603335 964 ntBASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TIMMDC1Q9NPL8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 AC007322.4-201ENST00000509611 723 ntBASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMMDC1Q9NPL8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 AC073314.1-201ENST00000568729 2216 ntBASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 AC061975.6-201ENST00000579045 1553 ntBASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 AC083906.2-201ENST00000511578 360 ntBASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 AC005082.1-201ENST00000413042 2259 ntBASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMMDC1Q9NPL8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TIMMDC1Q9NPL8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.23■□□□□ 0.67
TIMMDC1Q9NPL8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMMDC1Q9NPL8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms