Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD248Q9HCU0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CD248Q9HCU0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD248Q9HCU0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CD248Q9HCU0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CD248Q9HCU0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD248Q9HCU0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD248Q9HCU0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD248Q9HCU0 AL355472.2-201ENST00000422958 438 ntBASIC21.04■□□□□ 0.96
CD248Q9HCU0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.04■□□□□ 0.96
CD248Q9HCU0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.04■□□□□ 0.96
CD248Q9HCU0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD248Q9HCU0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CD248Q9HCU0 Z98882.1-201ENST00000622160 2253 ntBASIC21.04■□□□□ 0.96
CD248Q9HCU0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD248Q9HCU0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD248Q9HCU0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CD248Q9HCU0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD248Q9HCU0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD248Q9HCU0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD248Q9HCU0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD248Q9HCU0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD248Q9HCU0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.03■□□□□ 0.96
CD248Q9HCU0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.03■□□□□ 0.96
CD248Q9HCU0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.03■□□□□ 0.96
CD248Q9HCU0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD248Q9HCU0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CD248Q9HCU0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD248Q9HCU0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD248Q9HCU0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.03■□□□□ 0.96
CD248Q9HCU0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD248Q9HCU0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
CD248Q9HCU0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD248Q9HCU0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD248Q9HCU0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.02■□□□□ 0.96
CD248Q9HCU0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD248Q9HCU0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD248Q9HCU0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.02■□□□□ 0.96
CD248Q9HCU0 GCSHP5-201ENST00000443090 522 ntBASIC21.02■□□□□ 0.96
CD248Q9HCU0 UNC93B5-201ENST00000530315 699 ntBASIC21.02■□□□□ 0.96
CD248Q9HCU0 CYP2T3P-201ENST00000601990 817 ntBASIC21.02■□□□□ 0.96
CD248Q9HCU0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.02■□□□□ 0.96
CD248Q9HCU0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD248Q9HCU0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CD248Q9HCU0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CD248Q9HCU0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CD248Q9HCU0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CD248Q9HCU0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CD248Q9HCU0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CD248Q9HCU0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CD248Q9HCU0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CD248Q9HCU0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.01■□□□□ 0.95
CD248Q9HCU0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 AC245052.3-201ENST00000450182 901 ntBASIC21.01■□□□□ 0.95
CD248Q9HCU0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CD248Q9HCU0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.01■□□□□ 0.95
CD248Q9HCU0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD248Q9HCU0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD248Q9HCU0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21■□□□□ 0.95
CD248Q9HCU0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CD248Q9HCU0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CD248Q9HCU0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21■□□□□ 0.95
CD248Q9HCU0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21■□□□□ 0.95
CD248Q9HCU0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21■□□□□ 0.95
CD248Q9HCU0 LSM12P1-201ENST00000411836 588 ntBASIC21■□□□□ 0.95
CD248Q9HCU0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CD248Q9HCU0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21■□□□□ 0.95
CD248Q9HCU0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD248Q9HCU0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21■□□□□ 0.95
CD248Q9HCU0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21■□□□□ 0.95
CD248Q9HCU0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD248Q9HCU0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21■□□□□ 0.95
CD248Q9HCU0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD248Q9HCU0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CD248Q9HCU0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21■□□□□ 0.95
CD248Q9HCU0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD248Q9HCU0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.99■□□□□ 0.95
CD248Q9HCU0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CD248Q9HCU0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD248Q9HCU0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.99■□□□□ 0.95
CD248Q9HCU0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD248Q9HCU0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD248Q9HCU0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD248Q9HCU0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD248Q9HCU0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.99■□□□□ 0.95
CD248Q9HCU0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.99■□□□□ 0.95
CD248Q9HCU0 AC128676.1-201ENST00000454392 318 ntBASIC20.99■□□□□ 0.95
CD248Q9HCU0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.99■□□□□ 0.95
CD248Q9HCU0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms