Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX47Q9H0S4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX47Q9H0S4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 TNXA-203ENST00000507684 2038 ntBASIC20.92■□□□□ 0.94
DDX47Q9H0S4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
DDX47Q9H0S4 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.92■□□□□ 0.94
DDX47Q9H0S4 AC004408.2-201ENST00000623613 2777 ntBASIC20.91■□□□□ 0.94
DDX47Q9H0S4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 AC007322.3-201ENST00000426526 701 ntBASIC20.91■□□□□ 0.94
DDX47Q9H0S4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX47Q9H0S4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.9■□□□□ 0.94
DDX47Q9H0S4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX47Q9H0S4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX47Q9H0S4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX47Q9H0S4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.89■□□□□ 0.94
DDX47Q9H0S4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
DDX47Q9H0S4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
DDX47Q9H0S4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX47Q9H0S4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX47Q9H0S4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX47Q9H0S4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX47Q9H0S4 RBM17P2-201ENST00000616397 1405 ntBASIC20.89■□□□□ 0.94
DDX47Q9H0S4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
DDX47Q9H0S4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX47Q9H0S4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX47Q9H0S4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX47Q9H0S4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX47Q9H0S4 CCDC92B-201ENST00000575506 885 ntBASIC20.89■□□□□ 0.93
DDX47Q9H0S4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX47Q9H0S4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX47Q9H0S4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX47Q9H0S4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms