Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
NBPF3Q9H094 AC026366.1-201ENST00000488803 879 ntBASIC23.92■■□□□ 1.42
NBPF3Q9H094 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.92■■□□□ 1.42
NBPF3Q9H094 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.92■■□□□ 1.42
NBPF3Q9H094 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.92■■□□□ 1.42
NBPF3Q9H094 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.92■■□□□ 1.42
NBPF3Q9H094 AL162377.1-201ENST00000618844 1793 ntBASIC23.92■■□□□ 1.42
NBPF3Q9H094 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NBPF3Q9H094 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.92■■□□□ 1.42
NBPF3Q9H094 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF3Q9H094 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
NBPF3Q9H094 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF3Q9H094 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF3Q9H094 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF3Q9H094 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF3Q9H094 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF3Q9H094 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.91■■□□□ 1.42
NBPF3Q9H094 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.91■■□□□ 1.42
NBPF3Q9H094 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.91■■□□□ 1.42
NBPF3Q9H094 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF3Q9H094 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.91■■□□□ 1.42
NBPF3Q9H094 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.91■■□□□ 1.42
NBPF3Q9H094 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF3Q9H094 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF3Q9H094 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF3Q9H094 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
NBPF3Q9H094 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.9■■□□□ 1.42
NBPF3Q9H094 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF3Q9H094 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF3Q9H094 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.9■■□□□ 1.42
NBPF3Q9H094 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF3Q9H094 UBE2SP1-201ENST00000450587 669 ntBASIC23.9■■□□□ 1.42
NBPF3Q9H094 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.9■■□□□ 1.42
NBPF3Q9H094 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.9■■□□□ 1.42
NBPF3Q9H094 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
NBPF3Q9H094 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
NBPF3Q9H094 HLA-B-256ENST00000639848 1089 ntBASIC23.9■■□□□ 1.42
NBPF3Q9H094 AC073648.6-201ENST00000641589 218 ntBASIC23.9■■□□□ 1.42
NBPF3Q9H094 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.9■■□□□ 1.42
NBPF3Q9H094 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.9■■□□□ 1.42
NBPF3Q9H094 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF3Q9H094 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF3Q9H094 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF3Q9H094 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.89■■□□□ 1.42
NBPF3Q9H094 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.42
NBPF3Q9H094 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.89■■□□□ 1.42
NBPF3Q9H094 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.89■■□□□ 1.41
NBPF3Q9H094 MIR1224-201ENST00000408193 85 ntBASIC23.89■■□□□ 1.41
NBPF3Q9H094 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
NBPF3Q9H094 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.89■■□□□ 1.41
NBPF3Q9H094 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
NBPF3Q9H094 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.89■■□□□ 1.41
NBPF3Q9H094 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NBPF3Q9H094 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
NBPF3Q9H094 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NBPF3Q9H094 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NBPF3Q9H094 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
NBPF3Q9H094 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.89■■□□□ 1.41
NBPF3Q9H094 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NBPF3Q9H094 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NBPF3Q9H094 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.88■■□□□ 1.41
NBPF3Q9H094 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.88■■□□□ 1.41
NBPF3Q9H094 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.88■■□□□ 1.41
NBPF3Q9H094 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF3Q9H094 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF3Q9H094 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.88■■□□□ 1.41
NBPF3Q9H094 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
NBPF3Q9H094 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF3Q9H094 UNC93B5-201ENST00000530315 699 ntBASIC23.88■■□□□ 1.41
NBPF3Q9H094 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
NBPF3Q9H094 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.88■■□□□ 1.41
NBPF3Q9H094 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
NBPF3Q9H094 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF3Q9H094 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF3Q9H094 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF3Q9H094 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.87■■□□□ 1.41
NBPF3Q9H094 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.87■■□□□ 1.41
NBPF3Q9H094 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.87■■□□□ 1.41
NBPF3Q9H094 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.87■■□□□ 1.41
NBPF3Q9H094 AC060766.5-201ENST00000590539 871 ntBASIC23.87■■□□□ 1.41
NBPF3Q9H094 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.87■■□□□ 1.41
NBPF3Q9H094 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF3Q9H094 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.87■■□□□ 1.41
NBPF3Q9H094 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF3Q9H094 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
NBPF3Q9H094 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF3Q9H094 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF3Q9H094 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms