Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXP3Q9BZS1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 AC010141.2-201ENST00000452426 721 ntBASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 UBE2DNL-204ENST00000602536 740 ntBASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXP3Q9BZS1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 AC125437.2-201ENST00000625180 2167 ntBASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXP3Q9BZS1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.7■□□□□ 0.91
FOXP3Q9BZS1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
FOXP3Q9BZS1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 KRT8P36-201ENST00000489121 1440 ntBASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXP3Q9BZS1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 AL050303.2-201ENST00000619798 666 ntBASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXP3Q9BZS1 AC018445.3-201ENST00000624177 1945 ntBASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 AP001160.3-201ENST00000601484 763 ntBASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXP3Q9BZS1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms