Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 LINC00557-201ENST00000563184 1279 ntBASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 VN1R92P-201ENST00000598511 928 ntBASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 AC234772.3-201ENST00000602277 528 ntBASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 AC104073.3-201ENST00000610942 955 ntBASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 AC009283.1-201ENST00000615852 645 ntBASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 VN1R7P-201ENST00000619242 903 ntBASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 AC015804.1-201ENST00000622935 435 ntBASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 FGL2-202ENST00000637771 989 ntBASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP3-3Q9BYR6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
KRTAP3-3Q9BYR6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC104446.1-201ENST00000613728 1321 ntBASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 KRTAP9-7-201ENST00000391354 1039 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 TTC32-202ENST00000402414 735 ntTSL 5 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 USP9YP11-201ENST00000427537 717 ntBASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 HTR5BP-201ENST00000430851 1154 ntBASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 KCNMB2-AS1-204ENST00000437488 964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AL591719.1-201ENST00000444669 744 ntBASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC051619.5-203ENST00000561404 529 ntTSL 4 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC025682.1-204ENST00000580045 733 ntTSL 5 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC006116.7-201ENST00000590141 756 ntBASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC133552.5-201ENST00000604266 540 ntBASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC084035.1-201ENST00000634543 607 ntBASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 AC090229.1-201ENST00000590983 1609 ntBASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 SPATA22-203ENST00000397168 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-3Q9BYR6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 FTLP10-201ENST00000503647 1501 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 GLRX-201ENST00000237858 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 OR5D14-201ENST00000335605 945 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 PPCS-201ENST00000372556 984 ntTSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 PPCS-204ENST00000372562 966 ntTSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 MIR122-201ENST00000385044 85 ntBASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 RNU6-233P-201ENST00000410845 141 ntBASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AC008268.1-201ENST00000425887 1119 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AL606469.1-201ENST00000443224 892 ntTSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 DUXAP8-207ENST00000456786 622 ntBASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 PRDX3P4-201ENST00000470828 747 ntBASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AC027544.1-201ENST00000538408 433 ntBASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 RAB6A-209ENST00000541973 1104 ntTSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AC084824.2-201ENST00000548906 345 ntBASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 DUXAP10-204ENST00000612052 616 ntBASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 AC127071.1-201ENST00000624997 712 ntBASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
KRTAP3-3Q9BYR6 TTC8-204ENST00000354441 1342 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 AC018358.1-201ENST00000631079 1402 ntBASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-3Q9BYR6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms