Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 RBM17P2-201ENST00000616397 1405 ntBASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF4Q9BUZ4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 AL162412.1-201ENST00000567129 965 ntBASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 MIR4651-201ENST00000582622 73 ntBASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 AC243732.1-201ENST00000612648 864 ntBASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAF4Q9BUZ4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 AL591742.1-201ENST00000604433 565 ntBASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 AC092118.2-201ENST00000613495 667 ntBASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF4Q9BUZ4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 AC061975.6-201ENST00000579045 1553 ntBASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 AC003102.1-202ENST00000563394 1796 ntBASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF4Q9BUZ4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF4Q9BUZ4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAF4Q9BUZ4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRAF4Q9BUZ4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAF4Q9BUZ4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAF4Q9BUZ4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms