Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.91■□□□□ 0.62
CPPED1Q9BRF8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 AC098818.2-201ENST00000564925 2320 ntBASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 AC005332.7-201ENST00000614046 2005 ntBASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 UBE2DNL-204ENST00000602536 740 ntBASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPPED1Q9BRF8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPPED1Q9BRF8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CPPED1Q9BRF8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 PGM5P4-201ENST00000421970 445 ntBASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPPED1Q9BRF8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 AL020996.1-203ENST00000536896 2307 ntBASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPPED1Q9BRF8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 CYP21A1P-202ENST00000354927 1481 ntBASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 KRT19P1-201ENST00000405746 1186 ntBASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 AC093484.2-201ENST00000580996 2166 ntBASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 MYCNOS-205ENST00000641950 531 ntBASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPPED1Q9BRF8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms