Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.68■□□□□ 0.42
VRK1Q99986 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.68■□□□□ 0.42
VRK1Q99986 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.68■□□□□ 0.42
VRK1Q99986 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VRK1Q99986 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.68■□□□□ 0.42
VRK1Q99986 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK1Q99986 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.68■□□□□ 0.42
VRK1Q99986 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK1Q99986 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
VRK1Q99986 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.68■□□□□ 0.42
VRK1Q99986 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VRK1Q99986 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VRK1Q99986 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK1Q99986 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.68■□□□□ 0.42
VRK1Q99986 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK1Q99986 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
VRK1Q99986 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.68■□□□□ 0.42
VRK1Q99986 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.67■□□□□ 0.42
VRK1Q99986 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VRK1Q99986 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VRK1Q99986 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VRK1Q99986 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VRK1Q99986 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.67■□□□□ 0.42
VRK1Q99986 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 ABHD17AP1-201ENST00000358206 933 ntBASIC17.67■□□□□ 0.42
VRK1Q99986 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 AC091799.1-201ENST00000422823 811 ntBASIC17.67■□□□□ 0.42
VRK1Q99986 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.67■□□□□ 0.42
VRK1Q99986 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.67■□□□□ 0.42
VRK1Q99986 RNA5SP413-201ENST00000516373 109 ntBASIC17.67■□□□□ 0.42
VRK1Q99986 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.67■□□□□ 0.42
VRK1Q99986 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.67■□□□□ 0.42
VRK1Q99986 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VRK1Q99986 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.67■□□□□ 0.42
VRK1Q99986 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.67■□□□□ 0.42
VRK1Q99986 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.67■□□□□ 0.42
VRK1Q99986 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.67■□□□□ 0.42
VRK1Q99986 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK1Q99986 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VRK1Q99986 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.66■□□□□ 0.42
VRK1Q99986 AC087289.5-201ENST00000586076 3175 ntBASIC17.66■□□□□ 0.42
VRK1Q99986 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK1Q99986 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VRK1Q99986 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
VRK1Q99986 LSM12P1-201ENST00000411836 588 ntBASIC17.66■□□□□ 0.42
VRK1Q99986 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
VRK1Q99986 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.66■□□□□ 0.42
VRK1Q99986 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK1Q99986 AC092118.2-201ENST00000613495 667 ntBASIC17.66■□□□□ 0.42
VRK1Q99986 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.66■□□□□ 0.42
VRK1Q99986 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK1Q99986 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.66■□□□□ 0.42
VRK1Q99986 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VRK1Q99986 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
VRK1Q99986 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK1Q99986 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK1Q99986 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK1Q99986 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.65■□□□□ 0.42
VRK1Q99986 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 AL020996.1-203ENST00000536896 2307 ntBASIC17.65■□□□□ 0.42
VRK1Q99986 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.65■□□□□ 0.42
VRK1Q99986 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VRK1Q99986 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.65■□□□□ 0.42
VRK1Q99986 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 FAM201B-201ENST00000458407 597 ntBASIC17.65■□□□□ 0.42
VRK1Q99986 AC097658.1-201ENST00000475555 843 ntBASIC17.65■□□□□ 0.42
VRK1Q99986 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.65■□□□□ 0.42
VRK1Q99986 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
VRK1Q99986 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.65■□□□□ 0.42
VRK1Q99986 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.65■□□□□ 0.42
VRK1Q99986 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
VRK1Q99986 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.65■□□□□ 0.42
VRK1Q99986 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
VRK1Q99986 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK1Q99986 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.64■□□□□ 0.42
VRK1Q99986 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VRK1Q99986 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK1Q99986 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms