Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.4□□□□□ -0.26
LITAFQ99732 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.4□□□□□ -0.26
LITAFQ99732 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LITAFQ99732 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LITAFQ99732 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.4□□□□□ -0.26
LITAFQ99732 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.4□□□□□ -0.26
LITAFQ99732 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.4□□□□□ -0.26
LITAFQ99732 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LITAFQ99732 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC13.4□□□□□ -0.26
LITAFQ99732 GUK1-208ENST00000366728 842 ntTSL 2 BASIC13.4□□□□□ -0.26
LITAFQ99732 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LITAFQ99732 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC13.4□□□□□ -0.26
LITAFQ99732 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC13.4□□□□□ -0.26
LITAFQ99732 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.4□□□□□ -0.26
LITAFQ99732 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 DPP3P2-201ENST00000416030 1696 ntBASIC13.4□□□□□ -0.26
LITAFQ99732 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.4□□□□□ -0.26
LITAFQ99732 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LITAFQ99732 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.39□□□□□ -0.27
LITAFQ99732 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LITAFQ99732 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.39□□□□□ -0.27
LITAFQ99732 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LITAFQ99732 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.39□□□□□ -0.27
LITAFQ99732 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC13.39□□□□□ -0.27
LITAFQ99732 AP004607.4-201ENST00000530158 1459 ntBASIC13.39□□□□□ -0.27
LITAFQ99732 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LITAFQ99732 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC13.39□□□□□ -0.27
LITAFQ99732 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LITAFQ99732 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.39□□□□□ -0.27
LITAFQ99732 AP000997.3-201ENST00000623333 2250 ntBASIC13.39□□□□□ -0.27
LITAFQ99732 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LITAFQ99732 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.39□□□□□ -0.27
LITAFQ99732 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LITAFQ99732 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LITAFQ99732 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.39□□□□□ -0.27
LITAFQ99732 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LITAFQ99732 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LITAFQ99732 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.39□□□□□ -0.27
LITAFQ99732 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LITAFQ99732 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LITAFQ99732 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.38□□□□□ -0.27
LITAFQ99732 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
LITAFQ99732 AL133373.2-201ENST00000623187 2828 ntBASIC13.38□□□□□ -0.27
LITAFQ99732 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LITAFQ99732 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.38□□□□□ -0.27
LITAFQ99732 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
LITAFQ99732 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
LITAFQ99732 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.38□□□□□ -0.27
LITAFQ99732 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.38□□□□□ -0.27
LITAFQ99732 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 AC018470.1-201ENST00000624790 3129 ntBASIC13.38□□□□□ -0.27
LITAFQ99732 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.38□□□□□ -0.27
LITAFQ99732 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LITAFQ99732 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.37□□□□□ -0.27
LITAFQ99732 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.37□□□□□ -0.27
LITAFQ99732 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.37□□□□□ -0.27
LITAFQ99732 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LITAFQ99732 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC13.37□□□□□ -0.27
LITAFQ99732 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.37□□□□□ -0.27
LITAFQ99732 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LITAFQ99732 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 AL033527.3-201ENST00000566366 1196 ntBASIC13.37□□□□□ -0.27
LITAFQ99732 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 ABHD17AP5-201ENST00000580133 923 ntBASIC13.37□□□□□ -0.27
LITAFQ99732 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LITAFQ99732 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.37□□□□□ -0.27
LITAFQ99732 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
LITAFQ99732 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.37□□□□□ -0.27
LITAFQ99732 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LITAFQ99732 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.37□□□□□ -0.27
LITAFQ99732 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms