Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 AL499627.2-201ENST00000606283 725 ntBASIC18.94■□□□□ 0.62
NR1H4Q96RI1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H4Q96RI1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 AC135050.7-201ENST00000624508 2218 ntBASIC18.93■□□□□ 0.62
NR1H4Q96RI1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 BX664725.1-201ENST00000438252 379 ntBASIC18.93■□□□□ 0.62
NR1H4Q96RI1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H4Q96RI1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H4Q96RI1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.91■□□□□ 0.62
NR1H4Q96RI1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.9■□□□□ 0.62
NR1H4Q96RI1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NR1H4Q96RI1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.89■□□□□ 0.62
NR1H4Q96RI1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms