Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 AC116562.2-201ENST00000507042 360 ntBASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 AL671883.3-201ENST00000603274 991 ntBASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.22■□□□□ 0.35
CSMD1Q96PZ7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 KRT8P10-201ENST00000450021 1447 ntBASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 FDX1P1-201ENST00000449115 551 ntBASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 AL691432.3-201ENST00000621860 400 ntBASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 AC068473.5-201ENST00000616428 2072 ntBASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 TSPY14P-201ENST00000303979 915 ntBASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSMD1Q96PZ7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSMD1Q96PZ7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 AP000593.1-201ENST00000393668 712 ntBASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 AC007322.3-201ENST00000426526 701 ntBASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CSMD1Q96PZ7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 AC116050.2-201ENST00000612102 1779 ntBASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.19■□□□□ 0.34
CSMD1Q96PZ7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 AL359075.1-203ENST00000462729 1002 ntBASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSMD1Q96PZ7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms