Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 AL390719.1-204ENST00000412397 1219 ntBASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 TSPY5P-201ENST00000426936 936 ntBASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 LINC02084-201ENST00000606069 1096 ntBASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 CYP21A1P-202ENST00000354927 1481 ntBASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3BQ96NU0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 TSPY21P-201ENST00000433481 731 ntBASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 TSPY23P-201ENST00000440136 739 ntBASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 EGLN1P1-201ENST00000531623 762 ntBASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 ABCB10P4-201ENST00000566803 2184 ntBASIC19.25■□□□□ 0.67
CNTNAP3BQ96NU0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 NBPF21P-201ENST00000425093 1451 ntBASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 KRT17P6-201ENST00000453795 1220 ntBASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3BQ96NU0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 AC245052.3-201ENST00000450182 901 ntBASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3BQ96NU0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3BQ96NU0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms