Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC138Q96M89 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC138Q96M89 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC138Q96M89 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC138Q96M89 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC138Q96M89 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CCDC138Q96M89 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC138Q96M89 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC138Q96M89 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC138Q96M89 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC138Q96M89 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC138Q96M89 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC138Q96M89 AC020907.5-201ENST00000624372 1936 ntBASIC19.83■□□□□ 0.77
CCDC138Q96M89 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC138Q96M89 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC138Q96M89 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.83■□□□□ 0.77
CCDC138Q96M89 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC138Q96M89 AC092720.2-201ENST00000602388 1665 ntBASIC19.83■□□□□ 0.76
CCDC138Q96M89 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC138Q96M89 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC138Q96M89 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC138Q96M89 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC138Q96M89 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC138Q96M89 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC138Q96M89 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC138Q96M89 MCRIP2P1-201ENST00000394346 511 ntBASIC19.82■□□□□ 0.76
CCDC138Q96M89 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 AC026185.1-201ENST00000445748 174 ntBASIC19.82■□□□□ 0.76
CCDC138Q96M89 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC138Q96M89 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC138Q96M89 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC138Q96M89 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC138Q96M89 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC138Q96M89 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC138Q96M89 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC138Q96M89 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC138Q96M89 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC138Q96M89 LINC01006-201ENST00000333319 2292 ntBASIC19.81■□□□□ 0.76
CCDC138Q96M89 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC138Q96M89 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC138Q96M89 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC138Q96M89 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC138Q96M89 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC138Q96M89 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC138Q96M89 AL356652.1-201ENST00000615962 565 ntBASIC19.81■□□□□ 0.76
CCDC138Q96M89 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC138Q96M89 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC138Q96M89 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC138Q96M89 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC138Q96M89 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
CCDC138Q96M89 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 AL512625.2-201ENST00000417533 625 ntBASIC19.8■□□□□ 0.76
CCDC138Q96M89 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 RAP2CP1-201ENST00000605103 478 ntBASIC19.8■□□□□ 0.76
CCDC138Q96M89 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC138Q96M89 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC138Q96M89 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms