Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LINC00479Q96M42 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC00479Q96M42 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00479Q96M42 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00479Q96M42 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LINC00479Q96M42 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
LINC00479Q96M42 TREX1-205ENST00000625293 1783 ntBASIC15.34■□□□□ 0.05
LINC00479Q96M42 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 AC093503.3-201ENST00000624917 2352 ntBASIC15.34■□□□□ 0.05
LINC00479Q96M42 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LINC00479Q96M42 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LINC00479Q96M42 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
LINC00479Q96M42 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LINC00479Q96M42 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00479Q96M42 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00479Q96M42 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 DPP3P2-201ENST00000416030 1696 ntBASIC15.34■□□□□ 0.05
LINC00479Q96M42 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00479Q96M42 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00479Q96M42 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00479Q96M42 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00479Q96M42 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.33■□□□□ 0.05
LINC00479Q96M42 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LINC00479Q96M42 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00479Q96M42 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00479Q96M42 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00479Q96M42 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00479Q96M42 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00479Q96M42 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LINC00479Q96M42 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC00479Q96M42 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC00479Q96M42 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC00479Q96M42 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC00479Q96M42 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
LINC00479Q96M42 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00479Q96M42 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00479Q96M42 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00479Q96M42 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00479Q96M42 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC00479Q96M42 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00479Q96M42 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC00479Q96M42 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.32■□□□□ 0.04
LINC00479Q96M42 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00479Q96M42 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LINC00479Q96M42 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
LINC00479Q96M42 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00479Q96M42 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00479Q96M42 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00479Q96M42 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00479Q96M42 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00479Q96M42 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
LINC00479Q96M42 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms