Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.25■□□□□ 0.99
CALR3Q96L12 AL591742.1-201ENST00000604433 565 ntBASIC21.25■□□□□ 0.99
CALR3Q96L12 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.25■□□□□ 0.99
CALR3Q96L12 MYCNOS-205ENST00000641950 531 ntBASIC21.25■□□□□ 0.99
CALR3Q96L12 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.25■□□□□ 0.99
CALR3Q96L12 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CALR3Q96L12 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.25■□□□□ 0.99
CALR3Q96L12 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CALR3Q96L12 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CALR3Q96L12 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALR3Q96L12 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CALR3Q96L12 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CALR3Q96L12 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CALR3Q96L12 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CALR3Q96L12 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.24■□□□□ 0.99
CALR3Q96L12 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.24■□□□□ 0.99
CALR3Q96L12 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.24■□□□□ 0.99
CALR3Q96L12 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.24■□□□□ 0.99
CALR3Q96L12 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CALR3Q96L12 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CALR3Q96L12 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CALR3Q96L12 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CALR3Q96L12 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.24■□□□□ 0.99
CALR3Q96L12 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.24■□□□□ 0.99
CALR3Q96L12 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CALR3Q96L12 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CALR3Q96L12 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CALR3Q96L12 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CALR3Q96L12 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.23■□□□□ 0.99
CALR3Q96L12 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.23■□□□□ 0.99
CALR3Q96L12 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CALR3Q96L12 AC087289.5-201ENST00000586076 3175 ntBASIC21.23■□□□□ 0.99
CALR3Q96L12 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CALR3Q96L12 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.23■□□□□ 0.99
CALR3Q96L12 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.23■□□□□ 0.99
CALR3Q96L12 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CALR3Q96L12 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.23■□□□□ 0.99
CALR3Q96L12 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.23■□□□□ 0.99
CALR3Q96L12 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CALR3Q96L12 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CALR3Q96L12 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CALR3Q96L12 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
CALR3Q96L12 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CALR3Q96L12 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CALR3Q96L12 AL691432.2-201ENST00000607222 2038 ntBASIC21.22■□□□□ 0.99
CALR3Q96L12 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.22■□□□□ 0.99
CALR3Q96L12 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CALR3Q96L12 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.22■□□□□ 0.99
CALR3Q96L12 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.22■□□□□ 0.99
CALR3Q96L12 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.22■□□□□ 0.99
CALR3Q96L12 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CALR3Q96L12 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CALR3Q96L12 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CALR3Q96L12 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
CALR3Q96L12 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CALR3Q96L12 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.22■□□□□ 0.99
CALR3Q96L12 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CALR3Q96L12 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.22■□□□□ 0.99
CALR3Q96L12 TERF1P5-201ENST00000477545 1207 ntBASIC21.22■□□□□ 0.99
CALR3Q96L12 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CALR3Q96L12 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.22■□□□□ 0.99
CALR3Q96L12 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CALR3Q96L12 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CALR3Q96L12 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.22■□□□□ 0.99
CALR3Q96L12 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CALR3Q96L12 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CALR3Q96L12 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CALR3Q96L12 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CALR3Q96L12 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CALR3Q96L12 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CALR3Q96L12 AC007322.4-201ENST00000509611 723 ntBASIC21.21■□□□□ 0.99
CALR3Q96L12 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.21■□□□□ 0.99
CALR3Q96L12 UBE2DNL-204ENST00000602536 740 ntBASIC21.21■□□□□ 0.99
CALR3Q96L12 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CALR3Q96L12 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CALR3Q96L12 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.21■□□□□ 0.99
CALR3Q96L12 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.21■□□□□ 0.99
CALR3Q96L12 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.21■□□□□ 0.99
CALR3Q96L12 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.21■□□□□ 0.99
CALR3Q96L12 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CALR3Q96L12 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.21■□□□□ 0.99
CALR3Q96L12 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CALR3Q96L12 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.21■□□□□ 0.99
CALR3Q96L12 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms