Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 AC005224.4-201ENST00000583262 1652 ntBASIC15.3■□□□□ 0.04
KCNS1Q96KK3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KCNS1Q96KK3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.29■□□□□ 0.04
KCNS1Q96KK3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KCNS1Q96KK3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 BX005040.4-201ENST00000637145 1518 ntBASIC15.28■□□□□ 0.04
KCNS1Q96KK3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 AC008764.7-201ENST00000593779 1081 ntBASIC15.28■□□□□ 0.04
KCNS1Q96KK3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KCNS1Q96KK3 LTB4R2-202ENST00000528054 3092 ntBASIC15.28■□□□□ 0.04
KCNS1Q96KK3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 AC007225.1-201ENST00000566331 1836 ntBASIC15.27■□□□□ 0.04
KCNS1Q96KK3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNS1Q96KK3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNS1Q96KK3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNS1Q96KK3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNS1Q96KK3 AC093503.3-201ENST00000624917 2352 ntBASIC15.27■□□□□ 0.03
KCNS1Q96KK3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNS1Q96KK3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
KCNS1Q96KK3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNS1Q96KK3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms