Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 PGM5P4-201ENST00000421970 445 ntBASIC20.65■□□□□ 0.9
IFT43Q96FT9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.65■□□□□ 0.9
IFT43Q96FT9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IFT43Q96FT9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
IFT43Q96FT9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
IFT43Q96FT9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
IFT43Q96FT9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IFT43Q96FT9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.64■□□□□ 0.9
IFT43Q96FT9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
IFT43Q96FT9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
IFT43Q96FT9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFT43Q96FT9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.64■□□□□ 0.89
IFT43Q96FT9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFT43Q96FT9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
IFT43Q96FT9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.64■□□□□ 0.89
IFT43Q96FT9 FAM201B-201ENST00000458407 597 ntBASIC20.64■□□□□ 0.89
IFT43Q96FT9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
IFT43Q96FT9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFT43Q96FT9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.64■□□□□ 0.89
IFT43Q96FT9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
IFT43Q96FT9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
IFT43Q96FT9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFT43Q96FT9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
IFT43Q96FT9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFT43Q96FT9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFT43Q96FT9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFT43Q96FT9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFT43Q96FT9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.63■□□□□ 0.89
IFT43Q96FT9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.63■□□□□ 0.89
IFT43Q96FT9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.63■□□□□ 0.89
IFT43Q96FT9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.63■□□□□ 0.89
IFT43Q96FT9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
IFT43Q96FT9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFT43Q96FT9 FEM1AP1-201ENST00000431297 1995 ntBASIC20.63■□□□□ 0.89
IFT43Q96FT9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFT43Q96FT9 CYP21A1P-202ENST00000354927 1481 ntBASIC20.62■□□□□ 0.89
IFT43Q96FT9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 BX276092.2-201ENST00000417668 665 ntBASIC20.62■□□□□ 0.89
IFT43Q96FT9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IFT43Q96FT9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.62■□□□□ 0.89
IFT43Q96FT9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms