Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 UPF3AP3-201ENST00000420996 769 ntBASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 MCRIP2P1-201ENST00000394346 511 ntBASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 DUX4L17-201ENST00000557360 1267 ntBASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AC092329.2-201ENST00000598402 547 ntBASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AC142381.3-201ENST00000568208 1670 ntBASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 KRT16P6-202ENST00000425692 1426 ntBASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 AC087742.1-201ENST00000575880 1738 ntBASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 BX119927.1-201ENST00000636596 1552 ntBASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 KRT18P38-201ENST00000449496 1282 ntBASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 AL121772.3-201ENST00000610840 674 ntBASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 AC063926.2-201ENST00000623766 1308 ntBASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 ECEL1P1-201ENST00000373592 1742 ntBASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 AL441883.1-201ENST00000566170 1045 ntBASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC8.25□□□□□ -1.09
SYNE2Q8WXH0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 ABBA01031674.1-201ENST00000635145 728 ntBASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 AL008721.1-201ENST00000609964 604 ntBASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms