Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
STAG1Q8WVM7 KRT8P17-201ENST00000453110 1448 ntBASIC23.75■■□□□ 1.39
STAG1Q8WVM7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
STAG1Q8WVM7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 AL512408.1-201ENST00000569378 2000 ntBASIC23.74■■□□□ 1.39
STAG1Q8WVM7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 UNC93B4-201ENST00000505679 747 ntBASIC23.74■■□□□ 1.39
STAG1Q8WVM7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 SOX15-203ENST00000570788 1093 ntBASIC23.74■■□□□ 1.39
STAG1Q8WVM7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 KRT8P20-201ENST00000423953 1409 ntBASIC23.74■■□□□ 1.39
STAG1Q8WVM7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.74■■□□□ 1.39
STAG1Q8WVM7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 AP003097.1-201ENST00000530657 1135 ntBASIC23.73■■□□□ 1.39
STAG1Q8WVM7 AC006058.3-201ENST00000606217 1069 ntBASIC23.73■■□□□ 1.39
STAG1Q8WVM7 AC006557.6-201ENST00000623071 864 ntBASIC23.73■■□□□ 1.39
STAG1Q8WVM7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.73■■□□□ 1.39
STAG1Q8WVM7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 LINC01006-201ENST00000333319 2292 ntBASIC23.72■■□□□ 1.39
STAG1Q8WVM7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 AL390719.1-204ENST00000412397 1219 ntBASIC23.72■■□□□ 1.39
STAG1Q8WVM7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 AC066615.1-201ENST00000640911 628 ntBASIC23.72■■□□□ 1.39
STAG1Q8WVM7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
STAG1Q8WVM7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 HLA-G-202ENST00000376815 851 ntBASIC23.71■■□□□ 1.39
STAG1Q8WVM7 HLA-G-203ENST00000376818 1127 ntBASIC23.71■■□□□ 1.39
STAG1Q8WVM7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
STAG1Q8WVM7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
STAG1Q8WVM7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
STAG1Q8WVM7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 AC128676.1-201ENST00000454392 318 ntBASIC23.7■■□□□ 1.38
STAG1Q8WVM7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
STAG1Q8WVM7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms