Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNED1Q8TER0 AC027702.1-201ENST00000563810 1770 ntBASIC24.66■■□□□ 1.54
SNED1Q8TER0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNED1Q8TER0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.66■■□□□ 1.54
SNED1Q8TER0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.66■■□□□ 1.54
SNED1Q8TER0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.66■■□□□ 1.54
SNED1Q8TER0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.66■■□□□ 1.54
SNED1Q8TER0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.66■■□□□ 1.54
SNED1Q8TER0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SNED1Q8TER0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNED1Q8TER0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SNED1Q8TER0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNED1Q8TER0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.66■■□□□ 1.54
SNED1Q8TER0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SNED1Q8TER0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNED1Q8TER0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNED1Q8TER0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNED1Q8TER0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 DUX4L26-201ENST00000489078 1255 ntBASIC24.65■■□□□ 1.54
SNED1Q8TER0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SNED1Q8TER0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNED1Q8TER0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.64■■□□□ 1.54
SNED1Q8TER0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNED1Q8TER0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.64■■□□□ 1.54
SNED1Q8TER0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNED1Q8TER0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SNED1Q8TER0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.64■■□□□ 1.54
SNED1Q8TER0 MESTP1-201ENST00000404287 994 ntBASIC24.64■■□□□ 1.54
SNED1Q8TER0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.64■■□□□ 1.54
SNED1Q8TER0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNED1Q8TER0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNED1Q8TER0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SNED1Q8TER0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.64■■□□□ 1.54
SNED1Q8TER0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SNED1Q8TER0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNED1Q8TER0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SNED1Q8TER0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
SNED1Q8TER0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.63■■□□□ 1.53
SNED1Q8TER0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNED1Q8TER0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SNED1Q8TER0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNED1Q8TER0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNED1Q8TER0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNED1Q8TER0 AP002982.1-201ENST00000492365 877 ntBASIC24.63■■□□□ 1.53
SNED1Q8TER0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC24.63■■□□□ 1.53
SNED1Q8TER0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNED1Q8TER0 NAPSB-206ENST00000562112 1266 ntBASIC24.63■■□□□ 1.53
SNED1Q8TER0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.63■■□□□ 1.53
SNED1Q8TER0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNED1Q8TER0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNED1Q8TER0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNED1Q8TER0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNED1Q8TER0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNED1Q8TER0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNED1Q8TER0 KSR1P1-201ENST00000446298 240 ntBASIC24.62■■□□□ 1.53
SNED1Q8TER0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.62■■□□□ 1.53
SNED1Q8TER0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.62■■□□□ 1.53
SNED1Q8TER0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
SNED1Q8TER0 AC006011.2-201ENST00000621313 1158 ntBASIC24.62■■□□□ 1.53
SNED1Q8TER0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SNED1Q8TER0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SNED1Q8TER0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNED1Q8TER0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
SNED1Q8TER0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SNED1Q8TER0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.62■■□□□ 1.53
SNED1Q8TER0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNED1Q8TER0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNED1Q8TER0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.61■■□□□ 1.53
SNED1Q8TER0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SNED1Q8TER0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
SNED1Q8TER0 AC004264.1-201ENST00000608354 794 ntBASIC24.61■■□□□ 1.53
SNED1Q8TER0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.61■■□□□ 1.53
SNED1Q8TER0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNED1Q8TER0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNED1Q8TER0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNED1Q8TER0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNED1Q8TER0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
SNED1Q8TER0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNED1Q8TER0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.61■■□□□ 1.53
SNED1Q8TER0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNED1Q8TER0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNED1Q8TER0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
SNED1Q8TER0 AC104076.2-201ENST00000448912 469 ntBASIC24.61■■□□□ 1.53
SNED1Q8TER0 AC010203.1-204ENST00000548782 407 ntBASIC24.61■■□□□ 1.53
SNED1Q8TER0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.61■■□□□ 1.53
SNED1Q8TER0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
SNED1Q8TER0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SNED1Q8TER0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SNED1Q8TER0 KRT16P1-201ENST00000399124 1418 ntBASIC24.6■■□□□ 1.53
SNED1Q8TER0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms