Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 PTBP1P-201ENST00000554374 1601 ntBASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 BX664615.1-201ENST00000443558 458 ntBASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 FAM207BP-201ENST00000447172 505 ntBASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
COL22A1Q8NFW1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL22A1Q8NFW1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL22A1Q8NFW1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.14■■□□□ 1.94
COL22A1Q8NFW1 AC026396.1-201ENST00000419388 421 ntBASIC27.14■■□□□ 1.94
COL22A1Q8NFW1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC27.14■■□□□ 1.94
COL22A1Q8NFW1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
COL22A1Q8NFW1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
COL22A1Q8NFW1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
COL22A1Q8NFW1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL22A1Q8NFW1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL22A1Q8NFW1 FAM86EP-206ENST00000510506 987 ntBASIC27.13■■□□□ 1.93
COL22A1Q8NFW1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC27.13■■□□□ 1.93
COL22A1Q8NFW1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC27.13■■□□□ 1.93
COL22A1Q8NFW1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL22A1Q8NFW1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC27.13■■□□□ 1.93
COL22A1Q8NFW1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL22A1Q8NFW1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.13■■□□□ 1.93
COL22A1Q8NFW1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 AC116407.4-201ENST00000623319 1061 ntBASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL22A1Q8NFW1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 KRT8P36-201ENST00000489121 1440 ntBASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 RNF152P1-201ENST00000397754 604 ntBASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 PCED1CP-201ENST00000419887 785 ntBASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 AC011506.1-201ENST00000474329 610 ntBASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 MIR2861-201ENST00000636310 90 ntBASIC27.11■■□□□ 1.93
COL22A1Q8NFW1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
COL22A1Q8NFW1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC27.1■■□□□ 1.93
COL22A1Q8NFW1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC27.1■■□□□ 1.93
COL22A1Q8NFW1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC27.1■■□□□ 1.93
COL22A1Q8NFW1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC27.1■■□□□ 1.93
COL22A1Q8NFW1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC27.1■■□□□ 1.93
COL22A1Q8NFW1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
COL22A1Q8NFW1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL22A1Q8NFW1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL22A1Q8NFW1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
COL22A1Q8NFW1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 HCG4P8-203ENST00000443049 980 ntBASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 AC139887.4-201ENST00000607877 719 ntBASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL22A1Q8NFW1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
COL22A1Q8NFW1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL22A1Q8NFW1 AC004980.1-204ENST00000429707 299 ntBASIC27.08■■□□□ 1.93
COL22A1Q8NFW1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
COL22A1Q8NFW1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC27.08■■□□□ 1.93
COL22A1Q8NFW1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms