Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.3■□□□□ 0.84
LPCAT1Q8NF37 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
LPCAT1Q8NF37 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT1Q8NF37 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT1Q8NF37 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT1Q8NF37 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT1Q8NF37 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LPCAT1Q8NF37 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
LPCAT1Q8NF37 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 LINC01521-201ENST00000504184 1943 ntBASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT1Q8NF37 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.28■□□□□ 0.84
LPCAT1Q8NF37 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.27■□□□□ 0.84
LPCAT1Q8NF37 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
LPCAT1Q8NF37 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT1Q8NF37 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 PTBP1P-201ENST00000554374 1601 ntBASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT1Q8NF37 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT1Q8NF37 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms