Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 AC092667.1-201ENST00000434301 2586 ntBASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 AL162377.1-201ENST00000618844 1793 ntBASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
SRFBP1Q8NEF9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 AL109923.1-201ENST00000618799 583 ntBASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRFBP1Q8NEF9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 GUSBP6-202ENST00000438529 1198 ntBASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 AL512408.1-201ENST00000569378 2000 ntBASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRFBP1Q8NEF9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 SMG8-203ENST00000578922 2178 ntBASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRFBP1Q8NEF9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SRFBP1Q8NEF9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.14■□□□□ 0.66
SRFBP1Q8NEF9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRFBP1Q8NEF9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.14■□□□□ 0.65
SRFBP1Q8NEF9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRFBP1Q8NEF9 HLA-G-202ENST00000376815 851 ntBASIC19.14■□□□□ 0.65
SRFBP1Q8NEF9 HLA-G-203ENST00000376818 1127 ntBASIC19.14■□□□□ 0.65
SRFBP1Q8NEF9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SRFBP1Q8NEF9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
SRFBP1Q8NEF9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SRFBP1Q8NEF9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SRFBP1Q8NEF9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.14■□□□□ 0.65
SRFBP1Q8NEF9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms