Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 AC022517.1-201ENST00000592429 346 ntBASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZNF439Q8NDP4 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.64■□□□□ 0.26
ZNF439Q8NDP4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
ZNF439Q8NDP4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF439Q8NDP4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF439Q8NDP4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 AC068338.2-201ENST00000563278 1430 ntBASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 AC087633.2-202ENST00000565166 1439 ntBASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 AIRN-201ENST00000601203 4374 ntBASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 BID-214ENST00000617586 542 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 CYP21A1P-202ENST00000354927 1481 ntBASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
ZNF439Q8NDP4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF439Q8NDP4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 RARRES2P4-201ENST00000514074 484 ntBASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF439Q8NDP4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms