Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 INGX-201ENST00000359239 846 ntBASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 FDX1P1-201ENST00000449115 551 ntBASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC168Q8NDH2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 TSPY5P-201ENST00000426936 936 ntBASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 PCED1CP-201ENST00000419887 785 ntBASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 AC246785.2-201ENST00000432512 513 ntBASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 AC093458.2-201ENST00000623150 629 ntBASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC168Q8NDH2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 AP000347.1-202ENST00000435868 847 ntBASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 AC130371.2-201ENST00000619443 611 ntBASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC168Q8NDH2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 AL138966.2-201ENST00000621997 464 ntBASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 KRT8P45-201ENST00000414328 1447 ntBASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 AC011506.1-201ENST00000474329 610 ntBASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC168Q8NDH2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms