Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 PTBP1P-201ENST00000554374 1601 ntBASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
LINC00116Q8NCU8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 WWOX-216ENST00000569818 525 ntBASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
LINC00116Q8NCU8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 MESTP1-201ENST00000404287 994 ntBASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 AC006011.2-201ENST00000621313 1158 ntBASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LINC00116Q8NCU8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 GUSBP5-202ENST00000510805 1989 ntBASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
LINC00116Q8NCU8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
LINC00116Q8NCU8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LINC00116Q8NCU8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LINC00116Q8NCU8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
LINC00116Q8NCU8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.64■■□□□ 1.69
LINC00116Q8NCU8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
LINC00116Q8NCU8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.62■■□□□ 1.69
LINC00116Q8NCU8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
LINC00116Q8NCU8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LINC00116Q8NCU8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LINC00116Q8NCU8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.61■■□□□ 1.69
LINC00116Q8NCU8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
LINC00116Q8NCU8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms